WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43C3.1.1 Sequence Name  C43C3.1.1
Length (nt)  2553   Chromosome Location  X: 9675873-9680169
Chromosome . Primary Identifier  X Chromosome Location . Start  9675873
Chromosome Location . End  9680169 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43C3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002067 ifp-1 C43C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43C3.1 C43C3.1 2331   X: 9676092-9676157

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43C3.1.1 9675873 9680169 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246648   285   X: 9675873-9676157 Caenorhabditis elegans
Exon246649   108   X: 9676247-9676354 Caenorhabditis elegans
Exon246650   153   X: 9676553-9676705 Caenorhabditis elegans
Exon246651   71   X: 9676755-9676825 Caenorhabditis elegans
Exon246652   880   X: 9677114-9677993 Caenorhabditis elegans
Exon246653   165   X: 9678041-9678205 Caenorhabditis elegans
Exon246654   378   X: 9678251-9678628 Caenorhabditis elegans
Exon246655   285   X: 9679117-9679401 Caenorhabditis elegans
Exon246656   114   X: 9679876-9679989 Caenorhabditis elegans
Exon246657   114   X: 9680056-9680169 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43C3.1.1 9675873 9680169 -1

1 Sequence

Length
2553

1 Sequence Ontology Term

Identifier Name Description
transcript