WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07E11.1b.1 Sequence Name  W07E11.1b.1
Length (nt)  6846   Chromosome Location  X: 10084622-10104137
Chromosome . Primary Identifier  X Chromosome Location . Start  10084622
Chromosome Location . End  10104137 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07E11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012326 W07E11.1 W07E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07E11.1b W07E11.1b 6558   X: 10084667-10084926

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W07E11.1b.1 10084622 10104137 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247984   305   X: 10084622-10084926 Caenorhabditis elegans
Exon247987   622   X: 10085180-10085801 Caenorhabditis elegans
Exon247990   187   X: 10086123-10086309 Caenorhabditis elegans
Exon247993   155   X: 10086915-10087069 Caenorhabditis elegans
Exon248007   156   X: 10095534-10095689 Caenorhabditis elegans
Exon248009   273   X: 10095748-10096020 Caenorhabditis elegans
Exon248011   153   X: 10096367-10096519 Caenorhabditis elegans
Exon248013   79   X: 10096703-10096781 Caenorhabditis elegans
Exon248015   422   X: 10097391-10097812 Caenorhabditis elegans
Exon248017   163   X: 10097931-10098093 Caenorhabditis elegans
Exon248019   30   X: 10098798-10098827 Caenorhabditis elegans
Exon248021   95   X: 10099066-10099160 Caenorhabditis elegans
Exon248023   558   X: 10099213-10099770 Caenorhabditis elegans
Exon248025   1262   X: 10099900-10101161 Caenorhabditis elegans
Exon248027   388   X: 10101207-10101594 Caenorhabditis elegans
Exon248029   156   X: 10101843-10101998 Caenorhabditis elegans
Exon248031   632   X: 10102202-10102833 Caenorhabditis elegans
Exon248033   799   X: 10102881-10103679 Caenorhabditis elegans
Exon248034   411   X: 10103727-10104137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W07E11.1b.1 10084622 10104137 1

1 Sequence

Length
6846

1 Sequence Ontology Term

Identifier Name Description
transcript