WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F3.1a.2 Sequence Name  F14F3.1a.2
Length (nt)  2389   Chromosome Location  X: 10505896-10519580
Chromosome . Primary Identifier  X Chromosome Location . Start  10505896
Chromosome Location . End  10519580 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F3.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006870 vab-3 F14F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F3.1a F14F3.1a 1368   X: 10505988-10505994

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F3.1a.2 10505896 10519580 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249235   99   X: 10505896-10505994 Caenorhabditis elegans
Exon249240   148   X: 10509453-10509600 Caenorhabditis elegans
Exon249242   78   X: 10510977-10511054 Caenorhabditis elegans
Exon249244   127   X: 10511123-10511249 Caenorhabditis elegans
Exon249246   104   X: 10511318-10511421 Caenorhabditis elegans
Exon249248   116   X: 10512298-10512413 Caenorhabditis elegans
Exon249253   123   X: 10516371-10516493 Caenorhabditis elegans
Exon249257   83   X: 10516560-10516642 Caenorhabditis elegans
Exon249261   278   X: 10517424-10517701 Caenorhabditis elegans
Exon249265   170   X: 10517840-10518009 Caenorhabditis elegans
Exon249271   1063   X: 10518518-10519580 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F3.1a.2 10505896 10519580 1

1 Sequence

Length
2389

1 Sequence Ontology Term

Identifier Name Description
transcript