WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59F5.6.2 Sequence Name  F59F5.6.2
Length (nt)  3834   Chromosome Location  X: 10549106-10554946
Chromosome . Primary Identifier  X Chromosome Location . Start  10549106
Chromosome Location . End  10554946 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59F5.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006364 syd-2 F59F5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59F5.6 F59F5.6 3420   X: 10549510-10549575

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59F5.6.2 10549106 10554946 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249369   470   X: 10549106-10549575 Caenorhabditis elegans
Exon249372   63   X: 10549902-10549964 Caenorhabditis elegans
Exon249374   185   X: 10550077-10550261 Caenorhabditis elegans
Exon249376   322   X: 10550314-10550635 Caenorhabditis elegans
Exon249378   319   X: 10551007-10551325 Caenorhabditis elegans
Exon249380   161   X: 10551370-10551530 Caenorhabditis elegans
Exon249382   123   X: 10551589-10551711 Caenorhabditis elegans
Exon249384   154   X: 10551791-10551944 Caenorhabditis elegans
Exon249386   305   X: 10552039-10552343 Caenorhabditis elegans
Exon249388   166   X: 10552435-10552600 Caenorhabditis elegans
Exon249390   227   X: 10552644-10552870 Caenorhabditis elegans
Exon249392   138   X: 10552921-10553058 Caenorhabditis elegans
Exon249394   174   X: 10553104-10553277 Caenorhabditis elegans
Exon249396   117   X: 10553327-10553443 Caenorhabditis elegans
Exon249398   94   X: 10553537-10553630 Caenorhabditis elegans
Exon249400   134   X: 10553869-10554002 Caenorhabditis elegans
Exon249402   132   X: 10554096-10554227 Caenorhabditis elegans
Exon249404   96   X: 10554277-10554372 Caenorhabditis elegans
Exon249406   330   X: 10554444-10554773 Caenorhabditis elegans
Exon249408   124   X: 10554823-10554946 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59F5.6.2 10549106 10554946 -1

1 Sequence

Length
3834

1 Sequence Ontology Term

Identifier Name Description
transcript