WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F59F5.6 Sequence Name  F59F5.6
Length (nt)  3420   Chromosome Location  X: 10549510-10549575
Chromosome . Primary Identifier  X Chromosome Location . Start  10549510
Chromosome Location . End  10549575
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59F5.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03447 SYD-2 130.3 1139 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00049228
WBRNAi00016140
WBRNAi00109586
WBRNAi00109197
WBRNAi00060577
WBRNAi00060580
WBRNAi00060574
WBRNAi00060575
WBRNAi00060576
WBRNAi00060578
WBRNAi00060579
WBRNAi00060581
WBRNAi00060582
WBRNAi00109295
WBRNAi00109489
WBRNAi00109392

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F59F5.6 10549510 10549575 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006364 syd-2 F59F5.6 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:F59F5.6 10549510 10549575 -1
CDS:F59F5.6 10549902 10549964 -1
CDS:F59F5.6 10550077 10550261 -1
CDS:F59F5.6 10550314 10550635 -1
CDS:F59F5.6 10551007 10551325 -1
CDS:F59F5.6 10551370 10551530 -1
CDS:F59F5.6 10551589 10551711 -1
CDS:F59F5.6 10551791 10551944 -1
CDS:F59F5.6 10552039 10552343 -1
CDS:F59F5.6 10552435 10552600 -1
CDS:F59F5.6 10552644 10552870 -1
CDS:F59F5.6 10552921 10553058 -1
CDS:F59F5.6 10553104 10553277 -1
CDS:F59F5.6 10553327 10553443 -1
CDS:F59F5.6 10553537 10553630 -1
CDS:F59F5.6 10553869 10554002 -1
CDS:F59F5.6 10554096 10554227 -1
CDS:F59F5.6 10554277 10554372 -1
CDS:F59F5.6 10554444 10554773 -1
CDS:F59F5.6 10554823 10554936 -1

1 Sequence

Length
3420

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F59F5.6.2 F59F5.6.2 3834   X: 10549106-10554946
Transcript:F59F5.6.1 F59F5.6.1 3901   X: 10549108-10555239