WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1c.1 Sequence Name  F31B12.1c.1
Length (nt)  5901   Chromosome Location  X: 10794857-10812534
Chromosome . Primary Identifier  X Chromosome Location . Start  10794857
Chromosome Location . End  10812534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1c F31B12.1c 5688   X: 10795070-10795207

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1c.1 10794857 10812534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250467   351   X: 10794857-10795207 Caenorhabditis elegans
Exon250481   146   X: 10796510-10796655 Caenorhabditis elegans
Exon250484   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250496   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250507   187   X: 10797362-10797548 Caenorhabditis elegans
Exon250520   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250532   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250544   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250556   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250568   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250580   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250592   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250604   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250617   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250629   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250641   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250653   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250667   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250679   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250691   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250703   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250715   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250727   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250740   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250751   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250763   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250775   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250787   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250799   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250811   210   X: 10809644-10809853 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1c.1 10794857 10812534 -1

1 Sequence

Length
5901

1 Sequence Ontology Term

Identifier Name Description
transcript