WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1a.1 Sequence Name  F31B12.1a.1
Length (nt)  5938   Chromosome Location  X: 10795747-10812572
Chromosome . Primary Identifier  X Chromosome Location . Start  10795747
Chromosome Location . End  10812572 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1a F31B12.1a 5697   X: 10795950-10796051

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1a.1 10795747 10812572 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250469   305   X: 10795747-10796051 Caenorhabditis elegans
Exon250480   146   X: 10796510-10796655 Caenorhabditis elegans
Exon250482   139   X: 10796939-10797077 Caenorhabditis elegans
Exon250494   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250506   187   X: 10797362-10797548 Caenorhabditis elegans
Exon250518   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250530   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250542   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250554   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250566   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250578   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250590   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250602   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250615   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250627   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250639   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250651   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250665   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250677   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250689   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250701   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250713   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250725   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250738   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250749   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250761   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250773   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250785   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250797   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250809   210   X: 10809644-10809853 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1a.1 10795747 10812572 -1

1 Sequence

Length
5938

1 Sequence Ontology Term

Identifier Name Description
transcript