WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1b.1 Sequence Name  F31B12.1b.1
Length (nt)  5909   Chromosome Location  X: 10796145-10812534
Chromosome . Primary Identifier  X Chromosome Location . Start  10796145
Chromosome Location . End  10812534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1b F31B12.1b 5607   X: 10796447-10796655

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1b.1 10796145 10812534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250470   511   X: 10796145-10796655 Caenorhabditis elegans
Exon250483   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250495   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250508   181   X: 10797368-10797548 Caenorhabditis elegans
Exon250519   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250531   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250543   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250555   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250567   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250579   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250591   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250603   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250616   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250628   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250640   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250652   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250666   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250678   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250690   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250702   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250714   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250726   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250739   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250750   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250762   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250774   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250786   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250798   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250810   210   X: 10809644-10809853 Caenorhabditis elegans
Exon250822   281   X: 10809914-10810194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1b.1 10796145 10812534 -1

1 Sequence

Length
5909

1 Sequence Ontology Term

Identifier Name Description
transcript