WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1f.1 Sequence Name  F31B12.1f.1
Length (nt)  5829   Chromosome Location  X: 10796447-10811705
Chromosome . Primary Identifier  X Chromosome Location . Start  10796447
Chromosome Location . End  10811705 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1f F31B12.1f 5661   X: 10796447-10796655

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1f.1 10796447 10811705 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250471   209   X: 10796447-10796655 Caenorhabditis elegans
Exon250487   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250499   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250511   181   X: 10797368-10797548 Caenorhabditis elegans
Exon250523   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250535   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250547   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250559   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250571   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250583   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250595   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250607   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250620   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250632   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250644   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250656   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250670   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250682   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250694   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250706   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250718   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250730   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250742   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250754   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250766   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250778   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250790   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250802   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250814   210   X: 10809644-10809853 Caenorhabditis elegans
Exon250826   281   X: 10809914-10810194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1f.1 10796447 10811705 -1

1 Sequence

Length
5829

1 Sequence Ontology Term

Identifier Name Description
transcript