WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1e.1 Sequence Name  F31B12.1e.1
Length (nt)  5637   Chromosome Location  X: 10796447-10812534
Chromosome . Primary Identifier  X Chromosome Location . Start  10796447
Chromosome Location . End  10812534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1e F31B12.1e 5637   X: 10796447-10796655

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1e.1 10796447 10812534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250472   209   X: 10796447-10796655 Caenorhabditis elegans
Exon250486   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250498   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250510   181   X: 10797368-10797548 Caenorhabditis elegans
Exon250522   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250534   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250546   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250558   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250570   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250582   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250594   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250606   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250619   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250631   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250643   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250655   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250669   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250681   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250693   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250705   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250717   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250729   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250737   169   X: 10807934-10808102 Caenorhabditis elegans
Exon250753   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250765   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250777   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250789   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250801   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250813   210   X: 10809644-10809853 Caenorhabditis elegans
Exon250825   281   X: 10809914-10810194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1e.1 10796447 10812534 -1

1 Sequence

Length
5637

1 Sequence Ontology Term

Identifier Name Description
transcript