WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1h.1 Sequence Name  F31B12.1h.1
Length (nt)  10515   Chromosome Location  X: 10796447-10838650
Chromosome . Primary Identifier  X Chromosome Location . Start  10796447
Chromosome Location . End  10838650 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1h F31B12.1h 10515   X: 10796447-10796655

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1h.1 10796447 10838650 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

64 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250475   209   X: 10796447-10796655 Caenorhabditis elegans
Exon250489   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250501   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250513   181   X: 10797368-10797548 Caenorhabditis elegans
Exon250525   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250537   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250549   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250561   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250573   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250585   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250597   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250609   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250622   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250634   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250646   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250658   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250672   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250684   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250696   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250708   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250720   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250732   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250744   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250756   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250768   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250780   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250792   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250804   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250816   210   X: 10809644-10809853 Caenorhabditis elegans
Exon250828   281   X: 10809914-10810194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1h.1 10796447 10838650 -1

1 Sequence

Length
10515

1 Sequence Ontology Term

Identifier Name Description
transcript