WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B12.1.1 Sequence Name  F08B12.1.1
Length (nt)  3001   Chromosome Location  X: 11385084-11392776
Chromosome . Primary Identifier  X Chromosome Location . Start  11385084
Chromosome Location . End  11392776 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008571 prmn-1 F08B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B12.1 F08B12.1 2601   X: 11385115-11385325

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08B12.1.1 11385084 11392776 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252669   242   X: 11385084-11385325 Caenorhabditis elegans
Exon252672   74   X: 11386777-11386850 Caenorhabditis elegans
Exon252675   89   X: 11388785-11388873 Caenorhabditis elegans
Exon252676   117   X: 11388930-11389046 Caenorhabditis elegans
Exon252677   121   X: 11389143-11389263 Caenorhabditis elegans
Exon252678   148   X: 11389311-11389458 Caenorhabditis elegans
Exon252679   80   X: 11389515-11389594 Caenorhabditis elegans
Exon252680   144   X: 11389641-11389784 Caenorhabditis elegans
Exon252681   139   X: 11389845-11389983 Caenorhabditis elegans
Exon252682   160   X: 11390032-11390191 Caenorhabditis elegans
Exon252683   150   X: 11390318-11390467 Caenorhabditis elegans
Exon252684   136   X: 11390514-11390649 Caenorhabditis elegans
Exon252685   171   X: 11390692-11390862 Caenorhabditis elegans
Exon252686   171   X: 11390910-11391080 Caenorhabditis elegans
Exon252687   197   X: 11391130-11391326 Caenorhabditis elegans
Exon252688   166   X: 11391373-11391538 Caenorhabditis elegans
Exon252689   90   X: 11391590-11391679 Caenorhabditis elegans
Exon252690   110   X: 11391729-11391838 Caenorhabditis elegans
Exon252691   75   X: 11391952-11392026 Caenorhabditis elegans
Exon252692   421   X: 11392356-11392776 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08B12.1.1 11385084 11392776 1

1 Sequence

Length
3001

1 Sequence Ontology Term

Identifier Name Description
transcript