WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42E11.3.1 Sequence Name  F42E11.3.1
Length (nt)  777   Chromosome Location  X: 11374599-11375609
Chromosome . Primary Identifier  X Chromosome Location . Start  11374599
Chromosome Location . End  11375609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42E11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009633 F42E11.3 F42E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42E11.3 F42E11.3 777   X: 11374599-11374745

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42E11.3.1 11374599 11375609 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252716   147   X: 11374599-11374745 Caenorhabditis elegans
Exon252717   147   X: 11374799-11374945 Caenorhabditis elegans
Exon252718   79   X: 11374994-11375072 Caenorhabditis elegans
Exon252719   170   X: 11375119-11375288 Caenorhabditis elegans
Exon252720   134   X: 11375333-11375466 Caenorhabditis elegans
Exon252721   100   X: 11375510-11375609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42E11.3.1 11374599 11375609 -1

1 Sequence

Length
777

1 Sequence Ontology Term

Identifier Name Description
transcript