WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E11.3e.1 Sequence Name  C34E11.3e.1
Length (nt)  4958   Chromosome Location  X: 11824176-11835882
Chromosome . Primary Identifier  X Chromosome Location . Start  11824176
Chromosome Location . End  11835882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E11.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044079 mtcl-1 C34E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E11.3e C34E11.3e 4950   X: 11824184-11824258

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3e.1 11824176 11835882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254297   83   X: 11824176-11824258 Caenorhabditis elegans
Exon254301   106   X: 11824311-11824416 Caenorhabditis elegans
Exon254311   164   X: 11826619-11826782 Caenorhabditis elegans
Exon254318   66   X: 11826993-11827058 Caenorhabditis elegans
Exon254325   165   X: 11827164-11827328 Caenorhabditis elegans
Exon254332   141   X: 11827746-11827886 Caenorhabditis elegans
Exon254339   411   X: 11827937-11828347 Caenorhabditis elegans
Exon254346   156   X: 11828462-11828617 Caenorhabditis elegans
Exon254353   83   X: 11828715-11828797 Caenorhabditis elegans
Exon254360   105   X: 11829296-11829400 Caenorhabditis elegans
Exon254367   206   X: 11829451-11829656 Caenorhabditis elegans
Exon254374   134   X: 11829869-11830002 Caenorhabditis elegans
Exon254381   288   X: 11830052-11830339 Caenorhabditis elegans
Exon254388   513   X: 11830747-11831259 Caenorhabditis elegans
Exon254395   166   X: 11831887-11832052 Caenorhabditis elegans
Exon254402   126   X: 11832115-11832240 Caenorhabditis elegans
Exon254409   335   X: 11832283-11832617 Caenorhabditis elegans
Exon254416   138   X: 11832683-11832820 Caenorhabditis elegans
Exon254426   363   X: 11833237-11833599 Caenorhabditis elegans
Exon254434   224   X: 11833705-11833928 Caenorhabditis elegans
Exon254442   153   X: 11833973-11834125 Caenorhabditis elegans
Exon254448   129   X: 11834388-11834516 Caenorhabditis elegans
Exon254455   86   X: 11834844-11834929 Caenorhabditis elegans
Exon254463   311   X: 11834974-11835284 Caenorhabditis elegans
Exon254471   85   X: 11835335-11835419 Caenorhabditis elegans
Exon254479   131   X: 11835613-11835743 Caenorhabditis elegans
Exon254484   90   X: 11835793-11835882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C34E11.3e.1 11824176 11835882 1

1 Sequence

Length
4958

1 Sequence Ontology Term

Identifier Name Description
transcript