WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02B4.1b.1 Sequence Name  C02B4.1b.1
Length (nt)  4697   Chromosome Location  X: 12678832-12689183
Chromosome . Primary Identifier  X Chromosome Location . Start  12678832
Chromosome Location . End  12689183 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02B4.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000082 adt-1 C02B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02B4.1b C02B4.1b 4377   X: 12679152-12679211

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C02B4.1b.1 12678832 12689183 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256030   380   X: 12678832-12679211 Caenorhabditis elegans
Exon256032   66   X: 12679384-12679449 Caenorhabditis elegans
Exon256034   135   X: 12679496-12679630 Caenorhabditis elegans
Exon256036   78   X: 12679932-12680009 Caenorhabditis elegans
Exon256038   129   X: 12680497-12680625 Caenorhabditis elegans
Exon256040   142   X: 12681253-12681394 Caenorhabditis elegans
Exon256042   133   X: 12681507-12681639 Caenorhabditis elegans
Exon256044   145   X: 12681687-12681831 Caenorhabditis elegans
Exon256046   281   X: 12681886-12682166 Caenorhabditis elegans
Exon256048   138   X: 12682216-12682353 Caenorhabditis elegans
Exon256050   169   X: 12682906-12683074 Caenorhabditis elegans
Exon256052   93   X: 12683121-12683213 Caenorhabditis elegans
Exon256054   170   X: 12683269-12683438 Caenorhabditis elegans
Exon256056   176   X: 12683486-12683661 Caenorhabditis elegans
Exon256058   214   X: 12683717-12683930 Caenorhabditis elegans
Exon256060   271   X: 12683976-12684246 Caenorhabditis elegans
Exon256062   77   X: 12684422-12684498 Caenorhabditis elegans
Exon256064   199   X: 12684544-12684742 Caenorhabditis elegans
Exon256066   277   X: 12684829-12685105 Caenorhabditis elegans
Exon256068   110   X: 12685157-12685266 Caenorhabditis elegans
Exon256070   178   X: 12685317-12685494 Caenorhabditis elegans
Exon256072   98   X: 12685539-12685636 Caenorhabditis elegans
Exon256074   243   X: 12685682-12685924 Caenorhabditis elegans
Exon256076   278   X: 12686450-12686727 Caenorhabditis elegans
Exon256078   95   X: 12687204-12687298 Caenorhabditis elegans
Exon256080   174   X: 12687429-12687602 Caenorhabditis elegans
Exon256082   76   X: 12687687-12687762 Caenorhabditis elegans
Exon256083   172   X: 12689012-12689183 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C02B4.1b.1 12678832 12689183 1

1 Sequence

Length
4697

1 Sequence Ontology Term

Identifier Name Description
transcript