WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F46G10.5a Sequence Name  F46G10.5a
Length (nt)  2481   Chromosome Location  X: 13342181-13342402
Chromosome . Primary Identifier  X Chromosome Location . Start  13342181
Chromosome Location . End  13342402
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46G10.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43306 PTR-24, isoform a 94.0 826 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00001486
WBRNAi00047571
WBRNAi00076964
WBRNAi00076932
WBRNAi00064607
WBRNAi00015125
WBRNAi00032389
WBRNAi00068524
WBRNAi00111661
WBRNAi00064805
WBRNAi00068966
WBRNAi00068967
WBRNAi00068968
WBRNAi00068969
WBRNAi00068970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F46G10.5a 13342181 13342402 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004238 ptr-24 F46G10.5 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:F46G10.5a 13342181 13342402 1
CDS:F46G10.5a 13343016 13343225 1
CDS:F46G10.5a 13343284 13343562 1
CDS:F46G10.5a 13343660 13343787 1
CDS:F46G10.5a 13343838 13343971 1
CDS:F46G10.5a 13344029 13344114 1
CDS:F46G10.5a 13344777 13344920 1
CDS:F46G10.5a 13344970 13345087 1
CDS:F46G10.5a 13345136 13345239 1
CDS:F46G10.5a 13345392 13345665 1
CDS:F46G10.5a 13345711 13345798 1
CDS:F46G10.5a 13345845 13346036 1
CDS:F46G10.5a 13346342 13346448 1
CDS:F46G10.5a 13346676 13346797 1
CDS:F46G10.5a 13346857 13346937 1
CDS:F46G10.5a 13347672 13347863 1

1 Sequence

Length
2481

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F46G10.5a.1 F46G10.5a.1 2736   X: 13342181-13348118