WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00201881 Gene Name  R01E6.19
Sequence Name  ? R01E6.19 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position 
Length (nt)  ? 141
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00201881

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R01E6.19 R01E6.19 141   X: 13540033-13540173
 

Other

0 CDSs

0 RNAi Result

12 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810
gk963581
gk298925
WBVar01787599
gk501864
gk834677
gk651430
WBVar02013741

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00201881 13540033 13540173 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_13540174..13542573   2400 X: 13540174-13542573 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00201881 13540033 13540173 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
141

1 Sequence Ontology Term