WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06G5.3a.1 Sequence Name  K06G5.3a.1
Length (nt)  1089   Chromosome Location  X: 14219568-14223256
Chromosome . Primary Identifier  X Chromosome Location . Start  14219568
Chromosome Location . End  14223256 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06G5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010607 K06G5.3 K06G5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06G5.3a K06G5.3a 1089   X: 14219568-14219642

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06G5.3a.1 14219568 14223256 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259494   75   X: 14219568-14219642 Caenorhabditis elegans
Exon259496   42   X: 14220055-14220096 Caenorhabditis elegans
Exon259498   63   X: 14220150-14220212 Caenorhabditis elegans
Exon259500   54   X: 14220309-14220362 Caenorhabditis elegans
Exon259502   66   X: 14220531-14220596 Caenorhabditis elegans
Exon259503   60   X: 14220702-14220761 Caenorhabditis elegans
Exon259505   72   X: 14220889-14220960 Caenorhabditis elegans
Exon259507   99   X: 14221044-14221142 Caenorhabditis elegans
Exon259509   72   X: 14221260-14221331 Caenorhabditis elegans
Exon259511   75   X: 14221551-14221625 Caenorhabditis elegans
Exon259513   69   X: 14221898-14221966 Caenorhabditis elegans
Exon259515   69   X: 14222178-14222246 Caenorhabditis elegans
Exon259517   51   X: 14222314-14222364 Caenorhabditis elegans
Exon259520   69   X: 14222590-14222658 Caenorhabditis elegans
Exon259522   87   X: 14222887-14222973 Caenorhabditis elegans
Exon259524   66   X: 14223191-14223256 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06G5.3a.1 14219568 14223256 -1

1 Sequence

Length
1089

1 Sequence Ontology Term

Identifier Name Description
transcript