WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E02H4.1c.1 Sequence Name  E02H4.1c.1
Length (nt)  2076   Chromosome Location  X: 14271108-14277082
Chromosome . Primary Identifier  X Chromosome Location . Start  14271108
Chromosome Location . End  14277082 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E02H4.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000952 del-1 E02H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E02H4.1c E02H4.1c 1950   X: 14271192-14271200

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:E02H4.1c.1 14271108 14277082 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259602   93   X: 14271108-14271200 Caenorhabditis elegans
Exon259605   117   X: 14272013-14272129 Caenorhabditis elegans
Exon259608   135   X: 14272192-14272326 Caenorhabditis elegans
Exon259611   99   X: 14272638-14272736 Caenorhabditis elegans
Exon259614   91   X: 14273255-14273345 Caenorhabditis elegans
Exon259617   75   X: 14273601-14273675 Caenorhabditis elegans
Exon259620   91   X: 14273770-14273860 Caenorhabditis elegans
Exon259623   100   X: 14274612-14274711 Caenorhabditis elegans
Exon259626   179   X: 14274777-14274955 Caenorhabditis elegans
Exon259629   123   X: 14275048-14275170 Caenorhabditis elegans
Exon259632   92   X: 14275215-14275306 Caenorhabditis elegans
Exon259635   260   X: 14275570-14275829 Caenorhabditis elegans
Exon259638   118   X: 14275884-14276001 Caenorhabditis elegans
Exon259641   181   X: 14276346-14276526 Caenorhabditis elegans
Exon259644   125   X: 14276710-14276834 Caenorhabditis elegans
Exon259647   197   X: 14276886-14277082 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:E02H4.1c.1 14271108 14277082 1

1 Sequence

Length
2076

1 Sequence Ontology Term

Identifier Name Description
transcript