WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42D1.3 Sequence Name  F42D1.3
Length (nt)  1356   Chromosome Location  X: 14800168-14800255
Chromosome . Primary Identifier  X Chromosome Location . Start  14800168
Chromosome Location . End  14800255
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42D1.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31511 SPRR-2 51.2 451 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047094
WBRNAi00072209
WBRNAi00014820
WBRNAi00032138

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42D1.3 14800168 14800255 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009629 sprr-2 F42D1.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42D1.3 14800168 14800255 1
CDS:F42D1.3 14801159 14801259 1
CDS:F42D1.3 14801304 14801476 1
CDS:F42D1.3 14801522 14801647 1
CDS:F42D1.3 14802083 14802164 1
CDS:F42D1.3 14802214 14802311 1
CDS:F42D1.3 14802889 14803071 1
CDS:F42D1.3 14803190 14803274 1
CDS:F42D1.3 14803321 14803449 1
CDS:F42D1.3 14803495 14803574 1
CDS:F42D1.3 14804025 14804235 1

1 Sequence

Length
1356

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42D1.3.2 F42D1.3.2 1674   X: 14793445-14804359
Transcript:F42D1.3.3 F42D1.3.3 1627   X: 14794208-14804359
Transcript:F42D1.3.1 F42D1.3.1 1526   X: 14800120-14804357