WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27C12.7.1 Sequence Name  C27C12.7.1
Length (nt)  2557   Chromosome Location  X: 14831831-14838191
Chromosome . Primary Identifier  X Chromosome Location . Start  14831831
Chromosome Location . End  14838191 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27C12.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001055 dpf-2 C27C12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27C12.7 C27C12.7 2490   X: 14831854-14831865

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C27C12.7.1 14831831 14838191 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261171   35   X: 14831831-14831865 Caenorhabditis elegans
Exon261172   139   X: 14831916-14832054 Caenorhabditis elegans
Exon261173   218   X: 14833282-14833499 Caenorhabditis elegans
Exon261174   129   X: 14833555-14833683 Caenorhabditis elegans
Exon261175   65   X: 14833728-14833792 Caenorhabditis elegans
Exon261176   273   X: 14833841-14834113 Caenorhabditis elegans
Exon261177   340   X: 14835221-14835560 Caenorhabditis elegans
Exon261178   327   X: 14835608-14835934 Caenorhabditis elegans
Exon261179   154   X: 14836036-14836189 Caenorhabditis elegans
Exon261180   90   X: 14836232-14836321 Caenorhabditis elegans
Exon261181   70   X: 14836372-14836441 Caenorhabditis elegans
Exon261182   122   X: 14836495-14836616 Caenorhabditis elegans
Exon261183   131   X: 14836666-14836796 Caenorhabditis elegans
Exon261184   103   X: 14836845-14836947 Caenorhabditis elegans
Exon261185   132   X: 14837738-14837869 Caenorhabditis elegans
Exon261186   74   X: 14837915-14837988 Caenorhabditis elegans
Exon261187   155   X: 14838037-14838191 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C27C12.7.1 14831831 14838191 1

1 Sequence

Length
2557

1 Sequence Ontology Term

Identifier Name Description
transcript