WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20D1.2.1 Sequence Name  F20D1.2.1
Length (nt)  2182   Chromosome Location  X: 14970751-14974779
Chromosome . Primary Identifier  X Chromosome Location . Start  14970751
Chromosome Location . End  14974779 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20D1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008974 tbc-1 F20D1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20D1.2 F20D1.2 1926   X: 14970760-14970815

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20D1.2.1 14970751 14974779 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261415   65   X: 14970751-14970815 Caenorhabditis elegans
Exon261416   76   X: 14970866-14970941 Caenorhabditis elegans
Exon261417   210   X: 14970998-14971207 Caenorhabditis elegans
Exon261418   158   X: 14971273-14971430 Caenorhabditis elegans
Exon261419   124   X: 14971692-14971815 Caenorhabditis elegans
Exon261420   86   X: 14971861-14971946 Caenorhabditis elegans
Exon261421   232   X: 14971993-14972224 Caenorhabditis elegans
Exon261422   102   X: 14972427-14972528 Caenorhabditis elegans
Exon261423   196   X: 14972577-14972772 Caenorhabditis elegans
Exon261424   104   X: 14972824-14972927 Caenorhabditis elegans
Exon261425   234   X: 14973231-14973464 Caenorhabditis elegans
Exon261426   266   X: 14974139-14974404 Caenorhabditis elegans
Exon261427   329   X: 14974451-14974779 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20D1.2.1 14970751 14974779 1

1 Sequence

Length
2182

1 Sequence Ontology Term

Identifier Name Description
transcript