WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07D5.1a.1 Sequence Name  R07D5.1a.1
Length (nt)  2606   Chromosome Location  X: 15120862-15147740
Chromosome . Primary Identifier  X Chromosome Location . Start  15120862
Chromosome Location . End  15147740 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07D5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006747 unc-7 R07D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07D5.1a R07D5.1a 1569   X: 15121822-15121970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1a.1 15120862 15147740 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261737   1109   X: 15120862-15121970 Caenorhabditis elegans
Exon261745   112   X: 15122604-15122715 Caenorhabditis elegans
Exon261756   168   X: 15122871-15123038 Caenorhabditis elegans
Exon261767   279   X: 15123085-15123363 Caenorhabditis elegans
Exon261778   113   X: 15123414-15123526 Caenorhabditis elegans
Exon261789   288   X: 15124586-15124873 Caenorhabditis elegans
Exon261800   138   X: 15124919-15125056 Caenorhabditis elegans
Exon261811   76   X: 15125112-15125187 Caenorhabditis elegans
Exon261824   51   X: 15127125-15127175 Caenorhabditis elegans
Exon261835   203   X: 15127380-15127582 Caenorhabditis elegans
Exon261853   69   X: 15147672-15147740 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1a.1 15120862 15147740 -1

1 Sequence

Length
2606

1 Sequence Ontology Term

Identifier Name Description
transcript