WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01D1.2w Sequence Name  T01D1.2w
Length (nt)  837   Chromosome Location  II: 167930-168047
Chromosome . Primary Identifier  II Chromosome Location . Start  167930
Chromosome Location . End  168047
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01D1.2w

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50674 ETR-1, isoform w 29.3 278 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00009094
WBRNAi00052116
WBRNAi00035014
WBRNAi00072605
WBRNAi00072604
WBRNAi00074641
WBRNAi00074643
WBRNAi00074642
WBRNAi00074645
WBRNAi00074644
WBRNAi00074647
WBRNAi00074646
WBRNAi00091268
WBRNAi00074648
WBRNAi00091005
WBRNAi00085855
WBRNAi00102173
WBRNAi00113335
WBRNAi00072606
WBRNAi00026147
WBRNAi00113333
WBRNAi00113332
WBRNAi00113331
WBRNAi00113334
WBRNAi00092390

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01D1.2w 167930 168047 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001340 etr-1 T01D1.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01D1.2w 167930 168047 1
CDS:T01D1.2w 168175 168393 1
CDS:T01D1.2w 168549 168689 1
CDS:T01D1.2w 168793 169023 1
CDS:T01D1.2w 169552 169679 1

1 Sequence

Length
837

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01D1.2w.1 T01D1.2w.1 837   II: 167930-169679