WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0348.4g Sequence Name  B0348.4g
Length (nt)  4185   Chromosome Location  V: 21007-21090
Chromosome . Primary Identifier  V Chromosome Location . Start  21007
Chromosome Location . End  21090
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0348.4g

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50641 EGL-8, isoform g 157.2 1394 Caenorhabditis elegans
 

Other

66 RNAi

WormBase ID
WBRNAi00095471
WBRNAi00061092
WBRNAi00089835
WBRNAi00038958
WBRNAi00038959
WBRNAi00061095
WBRNAi00064662
WBRNAi00078898
WBRNAi00080607
WBRNAi00095155
WBRNAi00095164
WBRNAi00024384
WBRNAi00008298
WBRNAi00008299
WBRNAi00095153
WBRNAi00060282
WBRNAi00060283
WBRNAi00060284
WBRNAi00060285
WBRNAi00060287
WBRNAi00060288
WBRNAi00060289
WBRNAi00060286
WBRNAi00060290
WBRNAi00063869
WBRNAi00063876
WBRNAi00061094
WBRNAi00061093
WBRNAi00095178
WBRNAi00095180

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0348.4g 21007 21090 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001177 egl-8 B0348.4 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0348.4g 21007 21090 1
CDS:B0348.4g 22495 22856 1
CDS:B0348.4g 23159 23294 1
CDS:B0348.4g 23562 23645 1
CDS:B0348.4g 23793 23896 1
CDS:B0348.4g 24788 25259 1
CDS:B0348.4g 25965 26129 1
CDS:B0348.4g 26194 26380 1
CDS:B0348.4g 29336 29515 1
CDS:B0348.4g 30200 30297 1
CDS:B0348.4g 31340 31582 1
CDS:B0348.4g 35015 35156 1
CDS:B0348.4g 36118 36855 1
CDS:B0348.4g 36918 37213 1
CDS:B0348.4g 38138 38269 1
CDS:B0348.4g 40454 40723 1
CDS:B0348.4g 41729 41844 1
CDS:B0348.4g 42040 42166 1
CDS:B0348.4g 42214 42317 1
CDS:B0348.4g 43026 43170 1

1 Sequence

Length
4185

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0348.4g.1 B0348.4g.1 4907   V: 20819-43704