WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F28C1.2b.1 Sequence Name  F28C1.2b.1
Length (nt)  1920   Chromosome Location  V: 12455728-12462816
Chromosome . Primary Identifier  V Chromosome Location . Start  12455728
Chromosome Location . End  12462816 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28C1.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001179 egl-10 F28C1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28C1.2b F28C1.2b 1920   V: 12455728-12456018

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28C1.2b.1 12455728 12462816 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201744   291   V: 12455728-12456018 Caenorhabditis elegans
Exon201745   93   V: 12456498-12456590 Caenorhabditis elegans
Exon201748   319   V: 12456942-12457260 Caenorhabditis elegans
Exon201751   135   V: 12457315-12457449 Caenorhabditis elegans
Exon201754   153   V: 12457495-12457647 Caenorhabditis elegans
Exon201757   402   V: 12457702-12458103 Caenorhabditis elegans
Exon201761   142   V: 12459370-12459511 Caenorhabditis elegans
Exon201764   159   V: 12459773-12459931 Caenorhabditis elegans
Exon201767   206   V: 12459982-12460187 Caenorhabditis elegans
Exon201769   20   V: 12462797-12462816 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28C1.2b.1 12455728 12462816 -1

1 Sequence

Length
1920

1 Sequence Ontology Term

Identifier Name Description
transcript