WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28C1.2b Sequence Name  F28C1.2b
Length (nt)  1920   Chromosome Location  V: 12455728-12456018
Chromosome . Primary Identifier  V Chromosome Location . Start  12455728
Chromosome Location . End  12456018
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28C1.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45947 EGL-10, isoform b 72.1 639 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00089859
WBRNAi00045799
WBRNAi00014033
WBRNAi00060477
WBRNAi00060478
WBRNAi00060479
WBRNAi00060480
WBRNAi00060481
WBRNAi00060482
WBRNAi00060484
WBRNAi00060485
WBRNAi00060483
WBRNAi00089985
WBRNAi00090144
WBRNAi00090303

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F28C1.2b 12455728 12456018 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001179 egl-10 F28C1.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F28C1.2b 12455728 12456018 -1
CDS:F28C1.2b 12456498 12456590 -1
CDS:F28C1.2b 12456942 12457260 -1
CDS:F28C1.2b 12457315 12457449 -1
CDS:F28C1.2b 12457495 12457647 -1
CDS:F28C1.2b 12457702 12458103 -1
CDS:F28C1.2b 12459370 12459511 -1
CDS:F28C1.2b 12459773 12459931 -1
CDS:F28C1.2b 12459982 12460187 -1
CDS:F28C1.2b 12462797 12462816 -1

1 Sequence

Length
1920

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28C1.2b.1 F28C1.2b.1 1920   V: 12455728-12462816