WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25E2.5a.1 Sequence Name  F25E2.5a.1
Length (nt)  3126   Chromosome Location  X: 817922-825475
Chromosome . Primary Identifier  X Chromosome Location . Start  817922
Chromosome Location . End  825475 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E2.5a F25E2.5a 2679   X: 818320-818425

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5a.1 817922 825475 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222720   504   X: 817922-818425 Caenorhabditis elegans
Exon222729   137   X: 819004-819140 Caenorhabditis elegans
Exon222738   307   X: 819189-819495 Caenorhabditis elegans
Exon222747   172   X: 819699-819870 Caenorhabditis elegans
Exon222756   53   X: 820203-820255 Caenorhabditis elegans
Exon222766   122   X: 820300-820421 Caenorhabditis elegans
Exon222774   131   X: 820601-820731 Caenorhabditis elegans
Exon222782   661   X: 822022-822682 Caenorhabditis elegans
Exon222794   126   X: 822853-822978 Caenorhabditis elegans
Exon222798   240   X: 823173-823412 Caenorhabditis elegans
Exon222806   152   X: 823459-823610 Caenorhabditis elegans
Exon222816   156   X: 823658-823813 Caenorhabditis elegans
Exon222822   102   X: 824068-824169 Caenorhabditis elegans
Exon222824   189   X: 825074-825262 Caenorhabditis elegans
Exon222832   74   X: 825402-825475 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5a.1 817922 825475 -1

1 Sequence

Length
3126

1 Sequence Ontology Term

Identifier Name Description
transcript