WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.5f.1 Sequence Name  T02C5.5f.1
Length (nt)  6894   Chromosome Location  X: 2710932-2736311
Chromosome . Primary Identifier  X Chromosome Location . Start  2710932
Chromosome Location . End  2736311 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.5f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006742 unc-2 T02C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.5f T02C5.5f 6198   X: 2711628-2711798

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5f.1 2710932 2736311 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226425   867   X: 2710932-2711798 Caenorhabditis elegans
Exon226437   179   X: 2712355-2712533 Caenorhabditis elegans
Exon226453   150   X: 2712582-2712731 Caenorhabditis elegans
Exon226467   291   X: 2712787-2713077 Caenorhabditis elegans
Exon226481   121   X: 2713276-2713396 Caenorhabditis elegans
Exon226494   54   X: 2714634-2714687 Caenorhabditis elegans
Exon226500   88   X: 2715092-2715179 Caenorhabditis elegans
Exon226514   101   X: 2716008-2716108 Caenorhabditis elegans
Exon226528   213   X: 2716157-2716369 Caenorhabditis elegans
Exon226546   89   X: 2716915-2717003 Caenorhabditis elegans
Exon226561   311   X: 2717108-2717418 Caenorhabditis elegans
Exon226576   653   X: 2717465-2718117 Caenorhabditis elegans
Exon226591   783   X: 2718804-2719586 Caenorhabditis elegans
Exon226606   106   X: 2719637-2719742 Caenorhabditis elegans
Exon226621   107   X: 2720170-2720276 Caenorhabditis elegans
Exon226636   287   X: 2720819-2721105 Caenorhabditis elegans
Exon226651   213   X: 2721155-2721367 Caenorhabditis elegans
Exon226666   121   X: 2721418-2721538 Caenorhabditis elegans
Exon226681   428   X: 2721584-2722011 Caenorhabditis elegans
Exon226696   128   X: 2722059-2722186 Caenorhabditis elegans
Exon226711   58   X: 2722642-2722699 Caenorhabditis elegans
Exon226730   203   X: 2723259-2723461 Caenorhabditis elegans
Exon226741   90   X: 2724083-2724172 Caenorhabditis elegans
Exon226756   193   X: 2724219-2724411 Caenorhabditis elegans
Exon226771   273   X: 2724464-2724736 Caenorhabditis elegans
Exon226786   128   X: 2724824-2724951 Caenorhabditis elegans
Exon226801   320   X: 2725442-2725761 Caenorhabditis elegans
Exon226814   97   X: 2730538-2730634 Caenorhabditis elegans
Exon226829   242   X: 2736070-2736311 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5f.1 2710932 2736311 -1

1 Sequence

Length
6894

1 Sequence Ontology Term

Identifier Name Description
transcript