WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C39E6.6 Sequence Name  C39E6.6
Length (nt)  1374   Chromosome Location  X: 4767264-4767324
Chromosome . Primary Identifier  X Chromosome Location . Start  4767264
Chromosome Location . End  4767324
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39E6.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06941 NPR-1 52.4 457 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00042213
WBRNAi00072197
WBRNAi00011783
WBRNAi00091291

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C39E6.6 4767264 4767324 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003807 npr-1 C39E6.6 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:C39E6.6 4767264 4767324 -1
CDS:C39E6.6 4767370 4767585 -1
CDS:C39E6.6 4767635 4767745 -1
CDS:C39E6.6 4768350 4768514 -1
CDS:C39E6.6 4768560 4768621 -1
CDS:C39E6.6 4768672 4768923 -1
CDS:C39E6.6 4768983 4769170 -1
CDS:C39E6.6 4769220 4769364 -1
CDS:C39E6.6 4769801 4769974 -1

1 Sequence

Length
1374

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C39E6.6.1 C39E6.6.1 1497   X: 4767152-4769985