WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C42D8.5 Sequence Name  C42D8.5
Length (nt)  2721   Chromosome Location  X: 5092842-5093012
Chromosome . Primary Identifier  X Chromosome Location . Start  5092842
Chromosome Location . End  5093012
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D8.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30627 ACN-1 100.7 906 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00001202
WBRNAi00042367
WBRNAi00063747
WBRNAi00024802
WBRNAi00008516
WBRNAi00066776
WBRNAi00063746
WBRNAi00066677
WBRNAi00065001
WBRNAi00105975
WBRNAi00106061
WBRNAi00099060
WBRNAi00108106
WBRNAi00029754
WBRNAi00063748
WBRNAi00099059
WBRNAi00066592

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C42D8.5 5092842 5093012 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:C42D8.5 5092842 5093012 -1
CDS:C42D8.5 5093063 5093294 -1
CDS:C42D8.5 5093664 5093893 -1
CDS:C42D8.5 5093946 5094234 -1
CDS:C42D8.5 5094283 5094429 -1
CDS:C42D8.5 5094483 5094733 -1
CDS:C42D8.5 5094790 5095291 -1
CDS:C42D8.5 5095351 5095667 -1
CDS:C42D8.5 5096373 5096444 -1
CDS:C42D8.5 5096510 5096599 -1
CDS:C42D8.5 5096648 5097067 -1

1 Sequence

Length
2721

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C42D8.5.1 C42D8.5.1 3082   X: 5092481-5097067