WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y34B4A.4a.1 Sequence Name  Y34B4A.4a.1
Length (nt)  2796   Chromosome Location  X: 5264326-5271800
Chromosome . Primary Identifier  X Chromosome Location . Start  5264326
Chromosome Location . End  5271800 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34B4A.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021320 Y34B4A.4 Y34B4A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34B4A.4a Y34B4A.4a 2634   X: 5264330-5264405

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y34B4A.4a.1 5264326 5271800 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232947   80   X: 5264326-5264405 Caenorhabditis elegans
Exon232949   65   X: 5264695-5264759 Caenorhabditis elegans
Exon232951   102   X: 5264812-5264913 Caenorhabditis elegans
Exon232953   143   X: 5264968-5265110 Caenorhabditis elegans
Exon232955   115   X: 5265157-5265271 Caenorhabditis elegans
Exon232957   471   X: 5265325-5265795 Caenorhabditis elegans
Exon232959   126   X: 5266923-5267048 Caenorhabditis elegans
Exon232961   89   X: 5267272-5267360 Caenorhabditis elegans
Exon232963   53   X: 5267409-5267461 Caenorhabditis elegans
Exon232966   107   X: 5268796-5268902 Caenorhabditis elegans
Exon232968   132   X: 5268956-5269087 Caenorhabditis elegans
Exon232970   140   X: 5269421-5269560 Caenorhabditis elegans
Exon232972   189   X: 5269620-5269808 Caenorhabditis elegans
Exon232974   78   X: 5269859-5269936 Caenorhabditis elegans
Exon232976   169   X: 5269990-5270158 Caenorhabditis elegans
Exon232978   90   X: 5270208-5270297 Caenorhabditis elegans
Exon232980   200   X: 5270369-5270568 Caenorhabditis elegans
Exon232982   153   X: 5271258-5271410 Caenorhabditis elegans
Exon232984   294   X: 5271507-5271800 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y34B4A.4a.1 5264326 5271800 1

1 Sequence

Length
2796

1 Sequence Ontology Term

Identifier Name Description
transcript