WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01C8.6.2 Sequence Name  W01C8.6.2
Length (nt)  2002   Chromosome Location  X: 5705690-5710737
Chromosome . Primary Identifier  X Chromosome Location . Start  5705690
Chromosome Location . End  5710737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01C8.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000295 cat-1 W01C8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01C8.6 W01C8.6 1662   X: 5705931-5706156

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01C8.6.2 5705690 5710737 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234707   467   X: 5705690-5706156 Caenorhabditis elegans
Exon234710   166   X: 5706205-5706370 Caenorhabditis elegans
Exon234712   116   X: 5706413-5706528 Caenorhabditis elegans
Exon234714   175   X: 5707223-5707397 Caenorhabditis elegans
Exon234716   102   X: 5707514-5707615 Caenorhabditis elegans
Exon234718   183   X: 5707666-5707848 Caenorhabditis elegans
Exon234722   143   X: 5709693-5709835 Caenorhabditis elegans
Exon234724   189   X: 5709878-5710066 Caenorhabditis elegans
Exon234726   158   X: 5710122-5710279 Caenorhabditis elegans
Exon234728   95   X: 5710332-5710426 Caenorhabditis elegans
Exon234729   143   X: 5710477-5710619 Caenorhabditis elegans
Exon234731   65   X: 5710673-5710737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01C8.6.2 5705690 5710737 -1

1 Sequence

Length
2002

1 Sequence Ontology Term

Identifier Name Description
transcript