WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W01C8.6 Sequence Name  W01C8.6
Length (nt)  1662   Chromosome Location  X: 5705931-5706156
Chromosome . Primary Identifier  X Chromosome Location . Start  5705931
Chromosome Location . End  5706156
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01C8.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35792 CAT-1 61.0 553 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000688
WBRNAi00054516
WBRNAi00019461
WBRNAi00036145
WBRNAi00114866

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W01C8.6 5705931 5706156 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000295 cat-1 W01C8.6 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:W01C8.6 5705931 5706156 -1
CDS:W01C8.6 5706205 5706370 -1
CDS:W01C8.6 5706413 5706528 -1
CDS:W01C8.6 5707223 5707397 -1
CDS:W01C8.6 5707514 5707615 -1
CDS:W01C8.6 5707666 5707848 -1
CDS:W01C8.6 5709693 5709835 -1
CDS:W01C8.6 5709878 5710066 -1
CDS:W01C8.6 5710122 5710279 -1
CDS:W01C8.6 5710332 5710426 -1
CDS:W01C8.6 5710477 5710585 -1

1 Sequence

Length
1662

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W01C8.6.2 W01C8.6.2 2002   X: 5705690-5710737
Transcript:W01C8.6.1 W01C8.6.1 1943   X: 5705690-5710625