WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07E4.1b.1 Sequence Name  R07E4.1b.1
Length (nt)  3671   Chromosome Location  X: 5959498-5970187
Chromosome . Primary Identifier  X Chromosome Location . Start  5959498
Chromosome Location . End  5970187 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E4.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019935 R07E4.1 R07E4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07E4.1b R07E4.1b 3108   X: 5963401-5963537

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R07E4.1b.1 5959498 5970187 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235331   139   X: 5959498-5959636 Caenorhabditis elegans
Exon235333   90   X: 5961222-5961311 Caenorhabditis elegans
Exon235335   71   X: 5961425-5961495 Caenorhabditis elegans
Exon235338   151   X: 5963387-5963537 Caenorhabditis elegans
Exon235340   38   X: 5963933-5963970 Caenorhabditis elegans
Exon235343   111   X: 5964766-5964876 Caenorhabditis elegans
Exon235346   204   X: 5965608-5965811 Caenorhabditis elegans
Exon235349   95   X: 5965869-5965963 Caenorhabditis elegans
Exon235352   190   X: 5966385-5966574 Caenorhabditis elegans
Exon235355   189   X: 5966641-5966829 Caenorhabditis elegans
Exon235358   108   X: 5966875-5966982 Caenorhabditis elegans
Exon235361   91   X: 5967038-5967128 Caenorhabditis elegans
Exon235364   210   X: 5967172-5967381 Caenorhabditis elegans
Exon235367   285   X: 5967583-5967867 Caenorhabditis elegans
Exon235370   145   X: 5967910-5968054 Caenorhabditis elegans
Exon235373   180   X: 5968123-5968302 Caenorhabditis elegans
Exon235376   115   X: 5968348-5968462 Caenorhabditis elegans
Exon235379   164   X: 5968509-5968672 Caenorhabditis elegans
Exon235382   77   X: 5968724-5968800 Caenorhabditis elegans
Exon235385   297   X: 5968854-5969150 Caenorhabditis elegans
Exon235388   232   X: 5969427-5969658 Caenorhabditis elegans
Exon235391   489   X: 5969699-5970187 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R07E4.1b.1 5959498 5970187 1

1 Sequence

Length
3671

1 Sequence Ontology Term

Identifier Name Description
transcript