WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07E4.1b Sequence Name  R07E4.1b
Length (nt)  3108   Chromosome Location  X: 5963401-5963537
Chromosome . Primary Identifier  X Chromosome Location . Start  5963401
Chromosome Location . End  5963537
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E4.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53534 R07E4.1, isoform b 119.1 1035 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00001497
WBRNAi00051471
WBRNAi00051472
WBRNAi00017552
WBRNAi00076601
WBRNAi00034709

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R07E4.1b 5963401 5963537 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019935 R07E4.1 R07E4.1 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:R07E4.1b 5963401 5963537 1
CDS:R07E4.1b 5963933 5963970 1
CDS:R07E4.1b 5964766 5964876 1
CDS:R07E4.1b 5965608 5965811 1
CDS:R07E4.1b 5965869 5965963 1
CDS:R07E4.1b 5966385 5966574 1
CDS:R07E4.1b 5966641 5966829 1
CDS:R07E4.1b 5966875 5966982 1
CDS:R07E4.1b 5967038 5967128 1
CDS:R07E4.1b 5967172 5967381 1
CDS:R07E4.1b 5967583 5967867 1
CDS:R07E4.1b 5967910 5968054 1
CDS:R07E4.1b 5968123 5968302 1
CDS:R07E4.1b 5968348 5968462 1
CDS:R07E4.1b 5968509 5968672 1
CDS:R07E4.1b 5968724 5968800 1
CDS:R07E4.1b 5968854 5969150 1
CDS:R07E4.1b 5969427 5969658 1
CDS:R07E4.1b 5969699 5969938 1

1 Sequence

Length
3108

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07E4.1b.1 R07E4.1b.1 3671   X: 5959498-5970187
Transcript:R07E4.1b.2 R07E4.1b.2 3371   X: 5963386-5970186