WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25B8.1a.1 Sequence Name  C25B8.1a.1
Length (nt)  2539   Chromosome Location  X: 6619911-6627995
Chromosome . Primary Identifier  X Chromosome Location . Start  6619911
Chromosome Location . End  6627995 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25B8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002233 kqt-1 C25B8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25B8.1a C25B8.1a 2079   X: 6620080-6620103

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25B8.1a.1 6619911 6627995 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237252   193   X: 6619911-6620103 Caenorhabditis elegans
Exon237253   97   X: 6621723-6621819 Caenorhabditis elegans
Exon237255   53   X: 6621869-6621921 Caenorhabditis elegans
Exon237257   149   X: 6622110-6622258 Caenorhabditis elegans
Exon237259   91   X: 6622312-6622402 Caenorhabditis elegans
Exon237261   127   X: 6622468-6622594 Caenorhabditis elegans
Exon237263   176   X: 6622639-6622814 Caenorhabditis elegans
Exon237267   126   X: 6623824-6623949 Caenorhabditis elegans
Exon237269   111   X: 6623998-6624108 Caenorhabditis elegans
Exon237271   182   X: 6624157-6624338 Caenorhabditis elegans
Exon237273   71   X: 6624388-6624458 Caenorhabditis elegans
Exon237275   153   X: 6624508-6624660 Caenorhabditis elegans
Exon237277   99   X: 6624897-6624995 Caenorhabditis elegans
Exon237279   296   X: 6626112-6626407 Caenorhabditis elegans
Exon237281   188   X: 6627266-6627453 Caenorhabditis elegans
Exon237284   427   X: 6627569-6627995 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25B8.1a.1 6619911 6627995 1

1 Sequence

Length
2539

1 Sequence Ontology Term

Identifier Name Description
transcript