WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C25B8.1a Sequence Name  C25B8.1a
Length (nt)  2079   Chromosome Location  X: 6620080-6620103
Chromosome . Primary Identifier  X Chromosome Location . Start  6620080
Chromosome Location . End  6620103
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25B8.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27086 KQT-1, isoform a 77.5 692 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00001487
WBRNAi00041160
WBRNAi00041161
WBRNAi00041162
WBRNAi00011145
WBRNAi00075817

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C25B8.1a 6620080 6620103 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002233 kqt-1 C25B8.1 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:C25B8.1a 6620080 6620103 1
CDS:C25B8.1a 6621723 6621819 1
CDS:C25B8.1a 6621869 6621921 1
CDS:C25B8.1a 6622110 6622258 1
CDS:C25B8.1a 6622312 6622402 1
CDS:C25B8.1a 6622468 6622594 1
CDS:C25B8.1a 6622639 6622814 1
CDS:C25B8.1a 6623824 6623949 1
CDS:C25B8.1a 6623998 6624108 1
CDS:C25B8.1a 6624157 6624338 1
CDS:C25B8.1a 6624388 6624458 1
CDS:C25B8.1a 6624508 6624660 1
CDS:C25B8.1a 6624897 6624995 1
CDS:C25B8.1a 6626112 6626407 1
CDS:C25B8.1a 6627266 6627453 1
CDS:C25B8.1a 6627569 6627704 1

1 Sequence

Length
2079

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C25B8.1a.1 C25B8.1a.1 2539   X: 6619911-6627995