WormMine: MRNA Transcript:F38B6.5a.1

• WormMine ID: Transcript:F38B6.5a.1
• Sequence Name: F38B6.5a.1
• Length (nt): 1314
• Chromosome Location: X: 6672819-6674423
• Chromosome . Primary Identifier: X
• Chromosome Location . Start: 6672819
• Chromosome Location . End: 6674423
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: F38B6.5a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00000745	col-172	F38B6.5	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:F38B6.5a	F38B6.5a	1026	X: 6672983-6673048

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: Transcript:F38B6.5a.1
• Start: 6672819
• End: 6674423
• Strand: 1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

6 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon237404			230	X: 6672819-6673048	Caenorhabditis elegans
Exon237407			111	X: 6673105-6673215	Caenorhabditis elegans
Exon237410			136	X: 6673261-6673396	Caenorhabditis elegans
Exon237413			120	X: 6673443-6673562	Caenorhabditis elegans
Exon237416			350	X: 6673608-6673957	Caenorhabditis elegans
Exon237422			367	X: 6674057-6674423	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:F38B6.5a.1
• Start: 6672819
• End: 6674423
• Strand: 1

1 Sequence

• Length: 1314

1 Sequence Ontology Term

• Name: transcript