WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11G12.3.1 Sequence Name  K11G12.3.1
Length (nt)  1829   Chromosome Location  X: 6716195-6718695
Chromosome . Primary Identifier  X Chromosome Location . Start  6716195
Chromosome Location . End  6718695 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11G12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004877 smf-2 K11G12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11G12.3 K11G12.3 1641   X: 6716358-6716447

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11G12.3.1 6716195 6718695 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237547   253   X: 6716195-6716447 Caenorhabditis elegans
Exon237548   45   X: 6716499-6716543 Caenorhabditis elegans
Exon237549   160   X: 6716590-6716749 Caenorhabditis elegans
Exon237550   112   X: 6716794-6716905 Caenorhabditis elegans
Exon237551   238   X: 6717107-6717344 Caenorhabditis elegans
Exon237552   87   X: 6717387-6717473 Caenorhabditis elegans
Exon237553   159   X: 6717522-6717680 Caenorhabditis elegans
Exon237554   156   X: 6717725-6717880 Caenorhabditis elegans
Exon237555   139   X: 6717925-6718063 Caenorhabditis elegans
Exon237556   131   X: 6718123-6718253 Caenorhabditis elegans
Exon237557   222   X: 6718297-6718518 Caenorhabditis elegans
Exon237558   127   X: 6718569-6718695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11G12.3.1 6716195 6718695 -1

1 Sequence

Length
1829

1 Sequence Ontology Term

Identifier Name Description
transcript