WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C53C9.3a Sequence Name  C53C9.3a
Length (nt)  1473   Chromosome Location  X: 7690933-7690990
Chromosome . Primary Identifier  X Chromosome Location . Start  7690933
Chromosome Location . End  7690990
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53C9.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34278 KVS-1, isoform a 54.8 490 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00043091
WBRNAi00012362
WBRNAi00030113
WBRNAi00087589
WBRNAi00087495
WBRNAi00087496
WBRNAi00085208
WBRNAi00085209
WBRNAi00085211
WBRNAi00085204

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C53C9.3a 7690933 7690990 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002242 kvs-1 C53C9.3 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C53C9.3a 7690933 7690990 -1
CDS:C53C9.3a 7691736 7691835 -1
CDS:C53C9.3a 7691888 7692117 -1
CDS:C53C9.3a 7692777 7692959 -1
CDS:C53C9.3a 7693008 7693122 -1
CDS:C53C9.3a 7693678 7693732 -1
CDS:C53C9.3a 7694281 7694433 -1
CDS:C53C9.3a 7694523 7694565 -1
CDS:C53C9.3a 7694944 7695125 -1
CDS:C53C9.3a 7696007 7696228 -1
CDS:C53C9.3a 7696431 7696521 -1
CDS:C53C9.3a 7707046 7707086 -1

1 Sequence

Length
1473

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C53C9.3a.1 C53C9.3a.1 1904   X: 7690543-7707127