WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:T20B5.3a Sequence Name  T20B5.3a
Length (nt)  2565   Chromosome Location  X: 9343744-9343907
Chromosome . Primary Identifier  X Chromosome Location . Start  9343744
Chromosome Location . End  9343907
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B5.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41843 OGA-1, isoform a 97.8 854 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00110199
WBRNAi00001344
WBRNAi00002375
WBRNAi00053604
WBRNAi00018892
WBRNAi00035695
WBRNAi00110204
WBRNAi00087508
WBRNAi00108167
WBRNAi00110201

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T20B5.3a 9343744 9343907 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020596 oga-1 T20B5.3 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T20B5.3a 9343744 9343907 -1
CDS:T20B5.3a 9343985 9344306 -1
CDS:T20B5.3a 9344366 9344630 -1
CDS:T20B5.3a 9344688 9344984 -1
CDS:T20B5.3a 9345066 9345319 -1
CDS:T20B5.3a 9345371 9345593 -1
CDS:T20B5.3a 9345713 9345860 -1
CDS:T20B5.3a 9345909 9346178 -1
CDS:T20B5.3a 9346223 9346385 -1
CDS:T20B5.3a 9346429 9346664 -1
CDS:T20B5.3a 9346996 9347145 -1
CDS:T20B5.3a 9347255 9347310 -1
CDS:T20B5.3a 9347362 9347378 -1

1 Sequence

Length
2565

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T20B5.3a.1 T20B5.3a.1 3026   X: 9343333-9347428