WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11A1.3c.1 Sequence Name  F11A1.3c.1
Length (nt)  2194   Chromosome Location  X: 10664406-10666871
Chromosome . Primary Identifier  X Chromosome Location . Start  10664406
Chromosome Location . End  10666871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A1.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000908 daf-12 F11A1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11A1.3c F11A1.3c 804   X: 10664406-10664585

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11A1.3c.1 10664406 10666871 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249797   180   X: 10664406-10664585 Caenorhabditis elegans
Exon249800   293   X: 10664630-10664922 Caenorhabditis elegans
Exon249810   162   X: 10664970-10665131 Caenorhabditis elegans
Exon249820   76   X: 10665178-10665253 Caenorhabditis elegans
Exon249832   1483   X: 10665389-10666871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11A1.3c.1 10664406 10666871 1

1 Sequence

Length
2194

1 Sequence Ontology Term

Identifier Name Description
transcript