WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B12.3h.1 Sequence Name  F08B12.3h.1
Length (nt)  3393   Chromosome Location  X: 11394699-11403796
Chromosome . Primary Identifier  X Chromosome Location . Start  11394699
Chromosome Location . End  11403796 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B12.3h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004831 slo-2 F08B12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B12.3h F08B12.3h 3393   X: 11394699-11394846

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08B12.3h.1 11394699 11403796 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252708   148   X: 11394699-11394846 Caenorhabditis elegans
Exon252719   88   X: 11394909-11394996 Caenorhabditis elegans
Exon252729   124   X: 11395267-11395390 Caenorhabditis elegans
Exon252737   123   X: 11395446-11395568 Caenorhabditis elegans
Exon252745   84   X: 11395617-11395700 Caenorhabditis elegans
Exon252753   343   X: 11395744-11396086 Caenorhabditis elegans
Exon252761   801   X: 11396349-11397149 Caenorhabditis elegans
Exon252769   150   X: 11397194-11397343 Caenorhabditis elegans
Exon252777   109   X: 11397394-11397502 Caenorhabditis elegans
Exon252785   179   X: 11397623-11397801 Caenorhabditis elegans
Exon252793   131   X: 11397848-11397978 Caenorhabditis elegans
Exon252801   441   X: 11398024-11398464 Caenorhabditis elegans
Exon252809   84   X: 11398512-11398595 Caenorhabditis elegans
Exon252817   75   X: 11398646-11398720 Caenorhabditis elegans
Exon252825   109   X: 11398770-11398878 Caenorhabditis elegans
Exon252833   145   X: 11399264-11399408 Caenorhabditis elegans
Exon252841   77   X: 11399466-11399542 Caenorhabditis elegans
Exon252849   145   X: 11403060-11403204 Caenorhabditis elegans
Exon252850   37   X: 11403760-11403796 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08B12.3h.1 11394699 11403796 -1

1 Sequence

Length
3393

1 Sequence Ontology Term

Identifier Name Description
transcript