WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08B12.3g.1 Sequence Name  F08B12.3g.1
Length (nt)  3432   Chromosome Location  X: 11394699-11404200
Chromosome . Primary Identifier  X Chromosome Location . Start  11394699
Chromosome Location . End  11404200 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B12.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004831 slo-2 F08B12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B12.3g F08B12.3g 3432   X: 11394699-11394846

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08B12.3g.1 11394699 11404200 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252709   148   X: 11394699-11394846 Caenorhabditis elegans
Exon252718   88   X: 11394909-11394996 Caenorhabditis elegans
Exon252728   124   X: 11395267-11395390 Caenorhabditis elegans
Exon252736   123   X: 11395446-11395568 Caenorhabditis elegans
Exon252744   84   X: 11395617-11395700 Caenorhabditis elegans
Exon252752   343   X: 11395744-11396086 Caenorhabditis elegans
Exon252760   801   X: 11396349-11397149 Caenorhabditis elegans
Exon252768   150   X: 11397194-11397343 Caenorhabditis elegans
Exon252776   109   X: 11397394-11397502 Caenorhabditis elegans
Exon252784   179   X: 11397623-11397801 Caenorhabditis elegans
Exon252792   131   X: 11397848-11397978 Caenorhabditis elegans
Exon252800   441   X: 11398024-11398464 Caenorhabditis elegans
Exon252808   84   X: 11398512-11398595 Caenorhabditis elegans
Exon252816   75   X: 11398646-11398720 Caenorhabditis elegans
Exon252824   109   X: 11398770-11398878 Caenorhabditis elegans
Exon252832   145   X: 11399264-11399408 Caenorhabditis elegans
Exon252840   77   X: 11399466-11399542 Caenorhabditis elegans
Exon252848   145   X: 11403060-11403204 Caenorhabditis elegans
Exon252851   76   X: 11404125-11404200 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08B12.3g.1 11394699 11404200 -1

1 Sequence

Length
3432

1 Sequence Ontology Term

Identifier Name Description
transcript