WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08B12.3f Sequence Name  F08B12.3f
Length (nt)  3378   Chromosome Location  X: 11394699-11394846
Chromosome . Primary Identifier  X Chromosome Location . Start  11394699
Chromosome Location . End  11394846
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B12.3f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47297 SLO-2, isoform f 129.2 1125 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00000745
WBRNAi00043963
WBRNAi00022321

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08B12.3f 11394699 11394846 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004831 slo-2 F08B12.3 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08B12.3f 11394699 11394846 -1
CDS:F08B12.3f 11394909 11394996 -1
CDS:F08B12.3f 11395267 11395390 -1
CDS:F08B12.3f 11395446 11395568 -1
CDS:F08B12.3f 11395617 11395700 -1
CDS:F08B12.3f 11395744 11396086 -1
CDS:F08B12.3f 11396349 11397149 -1
CDS:F08B12.3f 11397194 11397343 -1
CDS:F08B12.3f 11397394 11397502 -1
CDS:F08B12.3f 11397623 11397801 -1
CDS:F08B12.3f 11397848 11397978 -1
CDS:F08B12.3f 11398024 11398464 -1
CDS:F08B12.3f 11398512 11398595 -1
CDS:F08B12.3f 11398646 11398720 -1
CDS:F08B12.3f 11398770 11398878 -1
CDS:F08B12.3f 11399264 11399408 -1
CDS:F08B12.3f 11399466 11399542 -1
CDS:F08B12.3f 11403060 11403204 -1
CDS:F08B12.3f 11404923 11404944 -1

1 Sequence

Length
3378

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08B12.3f.1 F08B12.3f.1 3378   X: 11394699-11404944