WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F15A2.2 Sequence Name  F15A2.2
Length (nt)  1908   Chromosome Location  X: 13472155-13472247
Chromosome . Primary Identifier  X Chromosome Location . Start  13472155
Chromosome Location . End  13472247
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15A2.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35484 TRE-4 73.4 635 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00044667
WBRNAi00013334
WBRNAi00030978

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F15A2.2 13472155 13472247 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006610 tre-4 F15A2.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F15A2.2 13472155 13472247 1
CDS:F15A2.2 13472299 13472483 1
CDS:F15A2.2 13472528 13472671 1
CDS:F15A2.2 13473550 13473825 1
CDS:F15A2.2 13473872 13474040 1
CDS:F15A2.2 13474330 13474483 1
CDS:F15A2.2 13474525 13474633 1
CDS:F15A2.2 13474689 13474805 1
CDS:F15A2.2 13474851 13475085 1
CDS:F15A2.2 13475373 13475516 1
CDS:F15A2.2 13475573 13475854 1

1 Sequence

Length
1908

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F15A2.2.1 F15A2.2.1 1980   X: 13472155-13475926