WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H13N06.6a.1 Sequence Name  H13N06.6a.1
Length (nt)  1869   Chromosome Location  X: 15500256-15503396
Chromosome . Primary Identifier  X Chromosome Location . Start  15500256
Chromosome Location . End  15503396 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H13N06.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006541 tbh-1 H13N06.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H13N06.6a H13N06.6a 1758   X: 15500354-15500633

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H13N06.6a.1 15500256 15503396 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262543   378   X: 15500256-15500633 Caenorhabditis elegans
Exon262546   362   X: 15500682-15501043 Caenorhabditis elegans
Exon262549   118   X: 15501491-15501608 Caenorhabditis elegans
Exon262552   524   X: 15501665-15502188 Caenorhabditis elegans
Exon262555   81   X: 15502237-15502317 Caenorhabditis elegans
Exon262558   135   X: 15502905-15503039 Caenorhabditis elegans
Exon262561   189   X: 15503085-15503273 Caenorhabditis elegans
Exon262567   82   X: 15503315-15503396 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H13N06.6a.1 15500256 15503396 -1

1 Sequence

Length
1869

1 Sequence Ontology Term

Identifier Name Description
transcript