WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01C8.1b.1 Sequence Name  T01C8.1b.1
Length (nt)  2429   Chromosome Location  X: 16796089-16803398
Chromosome . Primary Identifier  X Chromosome Location . Start  16796089
Chromosome Location . End  16803398 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020142 aak-2 T01C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01C8.1b T01C8.1b 1881   X: 16796089-16796231

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01C8.1b.1 16796089 16803398 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264753   143   X: 16796089-16796231 Caenorhabditis elegans
Exon264756   164   X: 16799707-16799870 Caenorhabditis elegans
Exon264759   469   X: 16800046-16800514 Caenorhabditis elegans
Exon264762   119   X: 16800689-16800807 Caenorhabditis elegans
Exon264765   106   X: 16801033-16801138 Caenorhabditis elegans
Exon264768   106   X: 16801228-16801333 Caenorhabditis elegans
Exon264770   208   X: 16801383-16801590 Caenorhabditis elegans
Exon264774   312   X: 16801692-16802003 Caenorhabditis elegans
Exon264777   152   X: 16802414-16802565 Caenorhabditis elegans
Exon264781   650   X: 16802749-16803398 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01C8.1b.1 16796089 16803398 1

1 Sequence

Length
2429

1 Sequence Ontology Term

Identifier Name Description
transcript