WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01C8.7 Sequence Name  T01C8.7
Length (nt)  2307   Chromosome Location  X: 16803392-16803577
Chromosome . Primary Identifier  X Chromosome Location . Start  16803392
Chromosome Location . End  16803577
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C8.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39109 MEC-4 87.2 768 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00089577
WBRNAi00052113
WBRNAi00017962

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01C8.7 16803392 16803577 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003168 mec-4 T01C8.7 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01C8.7 16803392 16803577 -1
CDS:T01C8.7 16803717 16803792 -1
CDS:T01C8.7 16803841 16803969 -1
CDS:T01C8.7 16804027 16804087 -1
CDS:T01C8.7 16804132 16804246 -1
CDS:T01C8.7 16804370 16804465 -1
CDS:T01C8.7 16804517 16804689 -1
CDS:T01C8.7 16804783 16804871 -1
CDS:T01C8.7 16804914 16805071 -1
CDS:T01C8.7 16805119 16805267 -1
CDS:T01C8.7 16805365 16805525 -1
CDS:T01C8.7 16805742 16805853 -1
CDS:T01C8.7 16805906 16806268 -1
CDS:T01C8.7 16806316 16806571 -1
CDS:T01C8.7 16806932 16807114 -1

1 Sequence

Length
2307

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01C8.7.1 T01C8.7.1 2379   X: 16803321-16807115